PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG011210.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Whirly
Protein Properties Length: 158aa    MW: 18149.6 Da    PI: 8.975
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG011210.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly167.63.1e-52312121139
            Whirly  21 ldsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePlpdGsGlfvnlsvtn 113
                        +sg+ k+ ++G++ll++a+a+++r+ydW +kq+f+ls+ e+++l+ l+  +sceffhdp+++ s+eGkvrk+lkveP pdG G f+nlsv+n
  TRIDC7AG011210.4   3 SQSGAYKVAKEGFVLLQFAPAVGPRQYDWTRKQVFSLSVWEMGTLLTLGLTDSCEFFHDPFKGRSDEGKVRKVLKVEPTPDGNGRFFNLSVQN 95 
                       579****************************************************************************************** PP

            Whirly 114 slvkgnesfsvPvskaefavlrsllv 139
                        l++++e++++P++k+e+av+ s ++
  TRIDC7AG011210.4  96 RLLNVDENIYIPITKGEYAVIVSTFN 121
                       *********************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
RNSQSGAYKV AKEGFVLLQF APAVGPRQYD WTRKQVFSLS VWEMGTLLTL GLTDSCEFFH  60
DPFKGRSDEG KVRKVLKVEP TPDGNGRFFN LSVQNRLLNV DENIYIPITK GEYAVIVSTF  120
NYIIPHIMGW STFTNSIKPE ESQPYNRPQS SPELEWRR