PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG011210.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Whirly
Protein Properties Length: 132aa    MW: 15043.1 Da    PI: 6.526
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG011210.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly114.11e-3599553139
            Whirly  53 qsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139
                        +f+ls+ e+++l+ l+  +sceffhdp+++ s+eGkvrk+lkveP pdG G f+nlsv+n l++++e++++P++k+e+av+ s ++
  TRIDC7AG011210.6   9 RVFSLSVWEMGTLLTLGLTDSCEFFHDPFKGRSDEGKVRKVLKVEPTPDGNGRFFNLSVQNRLLNVDENIYIPITKGEYAVIVSTFN 95 
                       58********************************************************************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
GSMIGLASRV FSLSVWEMGT LLTLGLTDSC EFFHDPFKGR SDEGKVRKVL KVEPTPDGNG  60
RFFNLSVQNR LLNVDENIYI PITKGEYAVI VSTFNYIIPH IMGWSTFTNS IKPEESQPYN  120
RPQSSPELEW RR