PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG014310.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 241aa    MW: 27822.4 Da    PI: 9.1486
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG014310.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF92.32.3e-292373151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      kri+nk+ rqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++g+l+e+s+
  TRIDC7AG014310.1 23 KRIDNKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFST 73
                      79***********************************************96 PP
2K-box94.41.9e-31951869100
             K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                       ++ ++++s +qe+ kLk ++e Lq++qR+llGedL++L++keL+qLe+q+e slk+iR++K++  l+q+ el++ke++lq+ nk+Lrkk++e
  TRIDC7AG014310.1  95 ATPETEQSNYQEYLKLKTRVEFLQTTQRNLLGEDLGPLNMKELEQLENQIEISLKHIRATKSQQSLDQLFELKRKEQQLQDVNKDLRKKIQE 186
                       445668999*********************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
PGKKRASERQ GGGRMGRGKV ELKRIDNKIS RQVTFAKRRN GLLKKAYELS VLCDAEVALI  60
IFSTRGRLFE FSTSSCMYKT LERYRSCNFN SEATATPETE QSNYQEYLKL KTRVEFLQTT  120
QRNLLGEDLG PLNMKELEQL ENQIEISLKH IRATKSQQSL DQLFELKRKE QQLQDVNKDL  180
RKKIQETSVE NVLQMSCQDV GPSGSSGHAN QANQQEYFHH DCDPSLHIGY QRNFLDQLNK  240
E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24260.11e-76MIKC_MADS family protein