PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG014310.17
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 95aa    MW: 10768.7 Da    PI: 10.5403
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG014310.17genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.34.9e-29959151
                       S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
             SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                       kri+nk+ rqvtf+kRrng+lKKA+ELS LCdaeva+iifs +g+l+e+s+
  TRIDC7AG014310.17  9 KRIDNKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSARGRLFEFST 59
                       79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
MGRGKVELKR IDNKISRQVT FAKRRNGLLK KAYELSLLCD AEVALIIFSA RGRLFEFSTS  60
SRYPATPNSA PICLFQPKIF AFFFPAPQDL LHACM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15800.12e-33MIKC_MADS family protein