PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG014310.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 227aa    MW: 26378.8 Da    PI: 8.595
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG014310.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.73.1e-28959151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      kri+nk+ rqvtf+kRrng+lKKA+ELS LCdaeva+iifs +g+l+e+s+
  TRIDC7AG014310.6  9 KRIDNKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSARGRLFEFST 59
                      79***********************************************96 PP
2K-box92.47.6e-318517213100
             K-box  13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                       ++ s +qe+ kLk ++e Lq++qR+llGedL++L++keL+qLe+q+e slk+iR++K++  l+q+ el++ke++lq+ nk+Lrkk++e
  TRIDC7AG014310.6  85 TELSNYQEYLKLKTRVEFLQTTQRNLLGEDLGPLNMKELEQLENQIEISLKHIRATKSQQSLDQLFELKRKEQQLQDVNKDLRKKIQE 172
                       3456789*******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MGRGKVELKR IDNKISRQVT FAKRRNGLLK KAYELSLLCD AEVALIIFSA RGRLFEFSTS  60
SRMYKTLERY RSCNFNSEAT ATPETELSNY QEYLKLKTRV EFLQTTQRNL LGEDLGPLNM  120
KELEQLENQI EISLKHIRAT KSQQSLDQLF ELKRKEQQLQ DVNKDLRKKI QETSVENVLQ  180
MSCQDVGPSG SSGHANQANQ QEYFHHDCDP SLHIGYQRNF LDQLNKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02310.13e-77MIKC_MADS family protein