PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG015180.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 551aa MW: 61774.5 Da PI: 8.1686

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG015180.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.4	6.7e-20	63	149	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YAk GF v++++s++ +ng+ + t+ Cs++gk+++++ + +++ + tgCkak+++++ dg+++++++ l+HnH+l+p TRIDC7AG015180.4 63 EYYNTYAKAKGFGVTRRSSNRD-DNGQLKYLTYSCSRYGKAQSNSGN---MLKPSRTAGTGCKAKINITRAPDGRFHLSTVILDHNHTLSP 149 69*************99998.8889************9988...88999999****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MDDGIGGVQE SSDMSISSDD DGITQRRESN VELAHGPAEA QPDGSLGEPE VGMSFGTENE 60 VREYYNTYAK AKGFGVTRRS SNRDDNGQLK YLTYSCSRYG KAQSNSGNML KPSRTAGTGC 120 KAKINITRAP DGRFHLSTVI LDHNHTLSPL KPRRFRCNKK SDFRVKRRLE PNDPAEIRVN 180 KSSTIPRVTH FDIEKQFQSA YTNSKFKEFQ EELTQTMYCD RKLMQKEGAI ETYEITEDVL 240 IDEDKGWRKD IVHHVYFSEE EFEVKCSCRR FEFTGILCRH VLCVLTHKKI KEVPPQYVLD 300 RWKKNVNRKH NFIRCTYGGM EDTPAAERFD RLCNSFYPVA EIGAMSDDSC NALMEELHTL 360 KIRFSSNSSS ENVKEHVATR EDAPSNGKTT SKTIPSPIAV RCAGCPLPRK ESMLDKLICQ 420 ANEKKKEAEQ KASSTNLNKK RPRKNRKSSV DGILEQPVME HSSQQPVCLD GPASSITSQR 480 TFDLAITTSN INPSVTAAIP SGGSSTMVMP QILGEYTLMP FQVQQGSTIV SSSAELHFDG 540 IGGLNNKVDR S

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MDDGIGGVQE SSDMSISSDD DGITQRRESN VELAHGPAEA QPDGSLGEPE VGMSFGTENE  60
VREYYNTYAK AKGFGVTRRS SNRDDNGQLK YLTYSCSRYG KAQSNSGNML KPSRTAGTGC  120
KAKINITRAP DGRFHLSTVI LDHNHTLSPL KPRRFRCNKK SDFRVKRRLE PNDPAEIRVN  180
KSSTIPRVTH FDIEKQFQSA YTNSKFKEFQ EELTQTMYCD RKLMQKEGAI ETYEITEDVL  240
IDEDKGWRKD IVHHVYFSEE EFEVKCSCRR FEFTGILCRH VLCVLTHKKI KEVPPQYVLD  300
RWKKNVNRKH NFIRCTYGGM EDTPAAERFD RLCNSFYPVA EIGAMSDDSC NALMEELHTL  360
KIRFSSNSSS ENVKEHVATR EDAPSNGKTT SKTIPSPIAV RCAGCPLPRK ESMLDKLICQ  420
ANEKKKEAEQ KASSTNLNKK RPRKNRKSSV DGILEQPVME HSSQQPVCLD GPASSITSQR  480
TFDLAITTSN INPSVTAAIP SGGSSTMVMP QILGEYTLMP FQVQQGSTIV SSSAELHFDG  540
IGGLNNKVDR S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	153	169	RRFRCNKKSDFRVKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	8e-19	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG015180.4