PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG015180.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 585aa MW: 65615.9 Da PI: 9.2016

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG015180.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.2	7.3e-20	97	183	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YAk GF v++++s++ +ng+ + t+ Cs++gk+++++ + +++ + tgCkak+++++ dg+++++++ l+HnH+l+p TRIDC7AG015180.5 97 EYYNTYAKAKGFGVTRRSSNRD-DNGQLKYLTYSCSRYGKAQSNSGN---MLKPSRTAGTGCKAKINITRAPDGRFHLSTVILDHNHTLSP 183 69*************99998.8889************9988...88999999****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 585 aa Download sequence
EYTPRRRRSR RRLGGGVRAG VPDPARGRGA RRRGMDDGIG GVQESSDMSI SSDDDGITQR 60 RESNVELAHG PAEAQPDGSL GEPEVGMSFG TENEVREYYN TYAKAKGFGV TRRSSNRDDN 120 GQLKYLTYSC SRYGKAQSNS GNMLKPSRTA GTGCKAKINI TRAPDGRFHL STVILDHNHT 180 LSPLKPRRFR CNKKSDFRVK RRLEPNDPAE IRVNKSSTIP RVTHFDIEKQ FQSAYTNSKF 240 KEFQEELTQT MYCDRKLMQK EGAIETYEIT EDVLIDEDKG WRKDIVHHVY FSEEEFEVKC 300 SCRRFEFTGI LCRHVLCVLT HKKIKEVPPQ YVLDRWKKNV NRKHNFIRCT YGGMEDTPAA 360 ERFDRLCNSF YPVAEIGAMS DDSCNALMEE LHTLKIRFSS NSSSENVKEH VATREDAPSN 420 GKTTSKTIPS PIAVRCAGCP LPRKESMLDK LICQANEKKK EAEQKASSTN LNKKRPRKNR 480 KSSVDGILEQ PVMEHSSQQP VCLDGPASSI TSQRTFDLAI TTSNINPSVT AAIPSGGSST 540 MVMPQILGEY TLMPFQVQQG STIVSSSAEL HFDGIGGLNN KVDRS

Sequence ? help Back to Top

Protein Sequence Length: 585 aa Download sequence

EYTPRRRRSR RRLGGGVRAG VPDPARGRGA RRRGMDDGIG GVQESSDMSI SSDDDGITQR  60
RESNVELAHG PAEAQPDGSL GEPEVGMSFG TENEVREYYN TYAKAKGFGV TRRSSNRDDN  120
GQLKYLTYSC SRYGKAQSNS GNMLKPSRTA GTGCKAKINI TRAPDGRFHL STVILDHNHT  180
LSPLKPRRFR CNKKSDFRVK RRLEPNDPAE IRVNKSSTIP RVTHFDIEKQ FQSAYTNSKF  240
KEFQEELTQT MYCDRKLMQK EGAIETYEIT EDVLIDEDKG WRKDIVHHVY FSEEEFEVKC  300
SCRRFEFTGI LCRHVLCVLT HKKIKEVPPQ YVLDRWKKNV NRKHNFIRCT YGGMEDTPAA  360
ERFDRLCNSF YPVAEIGAMS DDSCNALMEE LHTLKIRFSS NSSSENVKEH VATREDAPSN  420
GKTTSKTIPS PIAVRCAGCP LPRKESMLDK LICQANEKKK EAEQKASSTN LNKKRPRKNR  480
KSSVDGILEQ PVMEHSSQQP VCLDGPASSI TSQRTFDLAI TTSNINPSVT AAIPSGGSST  540
MVMPQILGEY TLMPFQVQQG STIVSSSAEL HFDGIGGLNN KVDRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	187	203	RRFRCNKKSDFRVKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	9e-19	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG015180.5