PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG015560.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CO-like

Protein Properties

Length: 249aa MW: 25403.2 Da PI: 7.4084

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG015560.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18.5	4.2e-06	16	58	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ ++ + l+C + lC C + H+ H++vpl TRIDC7AG015560.2 16 ACAVCGGA-AALYCPADAAALCVPCDAAVHSAnplasrHDRVPL 58 6****9.*******************66899999999986 PP
2	CCT	65.9	1.1e-22	170	213	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R+++++RY+eKrk+RkF K+irY+sRKa+Ae RpR+KGrFvk++ TRIDC7AG015560.2 170 RAERVRRYREKRKNRKFHKTIRYASRKAYAEARPRIKGRFVKRP 213 99****************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MESEGSTSPN GGAGAACAVC GGAAALYCPA DAAALCVPCD AAVHSANPLA SRHDRVPLTA 60 AVAATSGVYD LFVADDEGGS SWPTPGPGQG QGSPSSGSSG FSNGGGVEMS LFDLLSDVNL 120 VATGAGGSVP SDGGVAPLWL QPGLAADASA AWTPSWSPSE AVVVPSAADR AERVRRYREK 180 RKNRKFHKTI RYASRKAYAE ARPRIKGRFV KRPAADDSMS AGEAAKFWLS FSDNSVGFQV 240 ASHGVVPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15850.1	8e-12	CO-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG015560.2