PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG017860.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 606aa    MW: 66447.2 Da    PI: 6.5071
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG017860.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like90.31.7e-28207260155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+ Lt+e+v+SHLQkYRl
  TRIDC7AG017860.1 207 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKRILELMNVEKLTRENVASHLQKYRL 260
                       79*******************.********************************8 PP
2Myb_DNA-binding38.92e-12209259148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r  W+ e++ ++v av+qlG +   +k+I + m+ +++t++++ s++qky+
  TRIDC7AG017860.1 209 RVVWSVELHRKFVAAVNQLGIDkaVPKRILELMNvEKLTRENVASHLQKYR 259
                       678********************************99*************7 PP
3Response_reg78.52.3e-26281361109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl vdD+p+ +++l+++l++ +y +v+++ ++  al+ll+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++ +ge + +l+ + 
  TRIDC7AG017860.1  28 VLAVDDDPVCLKVLEVLLRRCQY-HVTTTNQAATALRLLRENKdmFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSVNGETKSVLKGIT 118
                       799********************.***************99999********************87754.558******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l Kp+ +eel++
  TRIDC7AG017860.1 119 HGACDYLLKPVRIEELRN 136
                       ****************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 606 aa     Download sequence    
MLLADMMMEA RKGLMERERD QFPVGMRVLA VDDDPVCLKV LEVLLRRCQY HVTTTNQAAT  60
ALRLLRENKD MFDLVISDVH MPDMDGFKLL ELVGLEMDLP VIMLSVNGET KSVLKGITHG  120
ACDYLLKPVR IEELRNVWQH VVRRKFCNRE PDNLDFCKDS YHRLGQAICD SHRSSDQSNR  180
ARRKRKELHS EEEDEGEDND DAAASKKPRV VWSVELHRKF VAAVNQLGID KAVPKRILEL  240
MNVEKLTREN VASHLQKYRL YLRRLSAVAS QQASIAAAFG GRDPFLHMGA FEGLHSYHQP  300
FAPSSGLPSF NPHGLLSGAG AAAFGLQDFV PSKAIQCDSS NGAISHCACD TIKFNIVSSQ  360
DNQQADLTQG LTASSSLGQR WIHQETNDLC SVFSRGALAS TMSSTFQRIT SSSLPPEDLL  420
ECTPHIKVGA HPSIGIQTAS SGLLERSQQG ALPIGDGFSI DKLPLHVSFD GAVATKPDAS  480
FAAEEQDMDQ KGIFSERMTV GVCPSESLIA ANNARCGASS SGSTLLLPHD TERHSKYLQF  540
GVASNSRHRM DGMRQDQRLN SGGFSYDGGA AIVPEHQQTD MDDLGTSKLQ GGSILAAATL  600
MAFSIP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1182187RRKRKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-106ARR-B family protein