PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG017860.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 605aa    MW: 66316 Da    PI: 6.5071
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG017860.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like90.31.7e-28206259155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+ Lt+e+v+SHLQkYRl
  TRIDC7AG017860.2 206 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKRILELMNVEKLTRENVASHLQKYRL 259
                       79*******************.********************************8 PP
2Myb_DNA-binding38.92e-12208258148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r  W+ e++ ++v av+qlG +   +k+I + m+ +++t++++ s++qky+
  TRIDC7AG017860.2 208 RVVWSVELHRKFVAAVNQLGIDkaVPKRILELMNvEKLTRENVASHLQKYR 258
                       678********************************99*************7 PP
3Response_reg78.52.3e-26271351109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl vdD+p+ +++l+++l++ +y +v+++ ++  al+ll+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++ +ge + +l+ + 
  TRIDC7AG017860.2  27 VLAVDDDPVCLKVLEVLLRRCQY-HVTTTNQAATALRLLRENKdmFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSVNGETKSVLKGIT 117
                       799********************.***************99999********************87754.558******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l Kp+ +eel++
  TRIDC7AG017860.2 118 HGACDYLLKPVRIEELRN 135
                       ****************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 605 aa     Download sequence    
LLADMMMEAR KGLMERERDQ FPVGMRVLAV DDDPVCLKVL EVLLRRCQYH VTTTNQAATA  60
LRLLRENKDM FDLVISDVHM PDMDGFKLLE LVGLEMDLPV IMLSVNGETK SVLKGITHGA  120
CDYLLKPVRI EELRNVWQHV VRRKFCNREP DNLDFCKDSY HRLGQAICDS HRSSDQSNRA  180
RRKRKELHSE EEDEGEDNDD AAASKKPRVV WSVELHRKFV AAVNQLGIDK AVPKRILELM  240
NVEKLTRENV ASHLQKYRLY LRRLSAVASQ QASIAAAFGG RDPFLHMGAF EGLHSYHQPF  300
APSSGLPSFN PHGLLSGAGA AAFGLQDFVP SKAIQCDSSN GAISHCACDT IKFNIVSSQD  360
NQQADLTQGL TASSSLGQRW IHQETNDLCS VFSRGALAST MSSTFQRITS SSLPPEDLLE  420
CTPHIKVGAH PSIGIQTASS GLLERSQQGA LPIGDGFSID KLPLHVSFDG AVATKPDASF  480
AAEEQDMDQK GIFSERMTVG VCPSESLIAA NNARCGASSS GSTLLLPHDT ERHSKYLQFG  540
VASNSRHRMD GMRQDQRLNS GGFSYDGGAA IVPEHQQTDM DDLGTSKLQG GSILAAATLM  600
AFSIP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1181186RRKRKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-106ARR-B family protein