PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG018070.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 413aa MW: 41181.8 Da PI: 7.7302

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG018070.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.2	5.1e-12	202	247	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq TRIDC7AG018070.2 202 HSIAERLRRERIAERMKSLQELVPNA-----NKTDKASMLDEIIDYVKFLQ 247 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
TRARDRSMAG GDGGGGGGAQ DDFFDQMLST LPSAWGDLGA GGKSPWEIAA GAEDLGAFDE 60 STLLASRLRQ HQIGGEKPVM LQLTDLQRQG LGGEESGGTG FSPLPLFADR SPPQSREEMD 120 GGFKSPNGTG GDHALFNGFG VHGGGTAVQP PFGQGGSMSG QSFGGGPAAS GGTTAPASSG 180 GGAAPPRQTR VRARRGQATD PHSIAERLRR ERIAERMKSL QELVPNANKT DKASMLDEII 240 DYVKFLQLQV KVLSMSRLGG AAGMAPLVAS MSSEASTSNV MQANSSAKSS NGGGNSAAAA 300 AAKANGGGEN GGGGGGGSGL RVTEHQVAKM MEEDMGTAMQ YLQGKGLCLM PISLASAISS 360 ATTTTTSPAS LLARQAVRPA AAAAALASAN GGGDAAAVRP VKVDAGAASG GKP

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

TRARDRSMAG GDGGGGGGAQ DDFFDQMLST LPSAWGDLGA GGKSPWEIAA GAEDLGAFDE  60
STLLASRLRQ HQIGGEKPVM LQLTDLQRQG LGGEESGGTG FSPLPLFADR SPPQSREEMD  120
GGFKSPNGTG GDHALFNGFG VHGGGTAVQP PFGQGGSMSG QSFGGGPAAS GGTTAPASSG  180
GGAAPPRQTR VRARRGQATD PHSIAERLRR ERIAERMKSL QELVPNANKT DKASMLDEII  240
DYVKFLQLQV KVLSMSRLGG AAGMAPLVAS MSSEASTSNV MQANSSAKSS NGGGNSAAAA  300
AAKANGGGEN GGGGGGGSGL RVTEHQVAKM MEEDMGTAMQ YLQGKGLCLM PISLASAISS  360
ATTTTTSPAS LLARQAVRPA AAAAALASAN GGGDAAAVRP VKVDAGAASG GKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	207	212	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	4e-45	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG018070.2