PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG018070.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 390aa MW: 38922.4 Da PI: 6.3749

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG018070.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.3	4.7e-12	197	242	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq TRIDC7AG018070.5 197 HSIAERLRRERIAERMKSLQELVPNA-----NKTDKASMLDEIIDYVKFLQ 242 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MAGGDGGGGG GAQDDFFDQM LSTLPSAWGD LGAGGKSPWE IAAGAEDLGA FDESTLLASR 60 LRQHQIGGEK PVMLQLTDLQ RQGLGGEESG GTGFSPLPLF ADRSPPQSRE EMDGGFKSPN 120 GTMQGGDHAL FNGFGVHGGG TAVQPPFGQG GSMSGQSFGG GPAASGGTTA PASSGGGAAP 180 PRQTRVRARR GQATDPHSIA ERLRRERIAE RMKSLQELVP NANKTDKASM LDEIIDYVKF 240 LQLQVKVLSM SRLGGAAGMA PLVASMSSEA KSSNGGGNSA AAAAAKANGG GENGGGGGGG 300 SGLRVTEHQV AKMMEEDMGT AMQYLQGKGL CLMPISLASA ISSATTTTTS PASLLARQAV 360 RPAAAAAALA SANGGGDAAA VRPVKVDAGA

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MAGGDGGGGG GAQDDFFDQM LSTLPSAWGD LGAGGKSPWE IAAGAEDLGA FDESTLLASR  60
LRQHQIGGEK PVMLQLTDLQ RQGLGGEESG GTGFSPLPLF ADRSPPQSRE EMDGGFKSPN  120
GTMQGGDHAL FNGFGVHGGG TAVQPPFGQG GSMSGQSFGG GPAASGGTTA PASSGGGAAP  180
PRQTRVRARR GQATDPHSIA ERLRRERIAE RMKSLQELVP NANKTDKASM LDEIIDYVKF  240
LQLQVKVLSM SRLGGAAGMA PLVASMSSEA KSSNGGGNSA AAAAAKANGG GENGGGGGGG  300
SGLRVTEHQV AKMMEEDMGT AMQYLQGKGL CLMPISLASA ISSATTTTTS PASLLARQAV  360
RPAAAAAALA SANGGGDAAA VRPVKVDAGA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	202	207	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	3e-45	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG018070.5