PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG018910.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 495aa MW: 54449.9 Da PI: 4.8823

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG018910.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60.2	6.3e-19	318	429	2	91
FAR1 2 fYneYAkevGFsvrkskskks..krngeitkrtfvCskegkreeekkk.....................tekerrtraetrtgCkaklkvkke 71 fYneYA +GF ++k+ +++ ++++ ++t++C+++gk e+ + k++r++ + tgC+ak+ +++ TRIDC7AG018910.2 318 FYNEYAAICGFAIKKAGNYHAtkPGSKTVSRYTYRCNRSGKVVGEDVLeerkkqrqlkkqekigipppeKAKRKRKNFIQITGCQAKMIATLK 410 **************999984344677999*****9765544445667799*******98888999999*********99 PP FAR1 72 kdgkwevtkleleHnHelap 91 +kw+vt ++leHnH+l+p TRIDC7AG018910.2 411 -GDKWVVTVVDLEHNHTLSP 429 .9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MGTQVPGETM AQGTPISHGP VPVDPVTSVH QPYVGAQYVQ QQQAGTRLAF QTSSSPFATH 60 EMNFLGSGYM SYTQLLMAAD QEVGIGGSQH SGQQQDSGGR GFCENDTYMI TERYGHLQGQ 120 DEGGQPTRRQ QAGNVDVGAE GFPSWSWDGN TAEGHQGCSY QPGYREQDSD DGDFDFDEGE 180 DDLDDDLDDE VAASSSHGPS FPEDMSLDGG LGDDSAAAGS SHGPSFMDGM SFDDVSDNGK 240 QIDAHGKNKN VCDCDDQQEG KPVQQENVEH LSQEDILMFI ESDSVCAAQA QTCSQEVRSH 300 HVPYVGMVFD SCDAAHAFYN EYAAICGFAI KKAGNYHATK PGSKTVSRYT YRCNRSGKVV 360 GEDVLEERKK QRQLKKQEKI GIPPPEKAKR KRKNFIQITG CQAKMIATLK GDKWVVTVVD 420 LEHNHTLSPP DESKYLRSHK KMTEEEKLFI RTFNSVQMPT RKIMAILSYL QGGDAPYTKK 480 YVSNVRTAIN RENDK

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MGTQVPGETM AQGTPISHGP VPVDPVTSVH QPYVGAQYVQ QQQAGTRLAF QTSSSPFATH  60
EMNFLGSGYM SYTQLLMAAD QEVGIGGSQH SGQQQDSGGR GFCENDTYMI TERYGHLQGQ  120
DEGGQPTRRQ QAGNVDVGAE GFPSWSWDGN TAEGHQGCSY QPGYREQDSD DGDFDFDEGE  180
DDLDDDLDDE VAASSSHGPS FPEDMSLDGG LGDDSAAAGS SHGPSFMDGM SFDDVSDNGK  240
QIDAHGKNKN VCDCDDQQEG KPVQQENVEH LSQEDILMFI ESDSVCAAQA QTCSQEVRSH  300
HVPYVGMVFD SCDAAHAFYN EYAAICGFAI KKAGNYHATK PGSKTVSRYT YRCNRSGKVV  360
GEDVLEERKK QRQLKKQEKI GIPPPEKAKR KRKNFIQITG CQAKMIATLK GDKWVVTVVD  420
LEHNHTLSPP DESKYLRSHK KMTEEEKLFI RTFNSVQMPT RKIMAILSYL QGGDAPYTKK  480
YVSNVRTAIN RENDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	5e-14	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG018910.2