PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG018910.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 373aa MW: 41414.6 Da PI: 4.8767

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG018910.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60.8	4.2e-19	210	321	2	91
FAR1 2 fYneYAkevGFsvrkskskks..krngeitkrtfvCskegkreeekkk.....................tekerrtraetrtgCkaklkvkke 71 fYneYA +GF ++k+ +++ ++++ ++t++C+++gk e+ + k++r++ + tgC+ak+ +++ TRIDC7AG018910.4 210 FYNEYAAICGFAIKKAGNYHAtkPGSKTVSRYTYRCNRSGKVVGEDVLeerkkqrqlkkqekigipppeKAKRKRKNFIQITGCQAKMIATLK 302 **************999984344677999*****9765544445667799*******98888999999*********99 PP FAR1 72 kdgkwevtkleleHnHelap 91 +kw+vt ++leHnH+l+p TRIDC7AG018910.4 303 -GDKWVVTVVDLEHNHTLSP 321 .9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MITERYGHLQ GQDEGGQPTR RQQAGNVDVG AEGFPSWSWD GNTAEGHQGC SYQPGYREQD 60 SDDGDFDFDE GEDDLDDDLD DEVAASSSHG PSFPEDMSLD GGLGDDSAAA GSSHGPSFMD 120 GMSFDDVSDN GKQIDAHGKN KNVCDCDDQQ EGKPVQQENV EHLSQEDILM FIESDSVCAA 180 QAQTCSQEVR SHHVPYVGMV FDSCDAAHAF YNEYAAICGF AIKKAGNYHA TKPGSKTVSR 240 YTYRCNRSGK VVGEDVLEER KKQRQLKKQE KIGIPPPEKA KRKRKNFIQI TGCQAKMIAT 300 LKGDKWVVTV VDLEHNHTLS PPDESKYLRS HKKMTEEEKL FIRTFNSVQM PTRKIMAILS 360 YLQGGDAPYT KKY

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MITERYGHLQ GQDEGGQPTR RQQAGNVDVG AEGFPSWSWD GNTAEGHQGC SYQPGYREQD  60
SDDGDFDFDE GEDDLDDDLD DEVAASSSHG PSFPEDMSLD GGLGDDSAAA GSSHGPSFMD  120
GMSFDDVSDN GKQIDAHGKN KNVCDCDDQQ EGKPVQQENV EHLSQEDILM FIESDSVCAA  180
QAQTCSQEVR SHHVPYVGMV FDSCDAAHAF YNEYAAICGF AIKKAGNYHA TKPGSKTVSR  240
YTYRCNRSGK VVGEDVLEER KKQRQLKKQE KIGIPPPEKA KRKRKNFIQI TGCQAKMIAT  300
LKGDKWVVTV VDLEHNHTLS PPDESKYLRS HKKMTEEEKL FIRTFNSVQM PTRKIMAILS  360
YLQGGDAPYT KKY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	2e-13	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG018910.4