PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG019400.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 200aa    MW: 22369.1 Da    PI: 8.7338
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG019400.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.8e-184695255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +++G+r+++ +g+W+AeIrdp++     r++lg++ +aeeAa+a++  +++++g
  TRIDC7AG019400.4 46 QFRGIRRRP-WGKWAAEIRDPRK---GVRVWLGTYNSAEEAARAYDVEARRIRG 95
                      69*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
VSKSDSNCHI NRLIFISLLH SDGLKATAAG DDDCASGSAK RKRKNQFRGI RRRPWGKWAA  60
EIRDPRKGVR VWLGTYNSAE EAARAYDVEA RRIRGKKAKV NFPEEAPMAP QQRCATSVKV  120
PEFNTEQKPV LNTMGNADVY SCPAVDYTIN QQFVQPQNMS FVPTVDAVEA PFMNFSSDQG  180
SNSFSCSDFS WENDIKTPDI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14054KRKRKNQFRGIRRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.19e-35ERF family protein