PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG020520.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 215aa    MW: 22997.1 Da    PI: 10.2946
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG020520.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.92e-171461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT  Ede+l+ +vk +G g+W+  +++ g++R++k+c++rw++yl
  TRIDC7AG020520.1 14 RGAWTSKEDEILASYVKAHGEGRWRELPQRAGLRRCGKSCRLRWLNYL 61
                      89********************************************97 PP
2Myb_DNA-binding461.3e-1467111147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg  + +E+el+v+++ +lG++ W+ Ia +++ gRt++++k++w++ 
  TRIDC7AG020520.1  67 RGDISDDEEELIVRLHGLLGNR-WSIIAGRLP-GRTDNEIKNYWNST 111
                       677799****************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MGRRACCAKE GVKRGAWTSK EDEILASYVK AHGEGRWREL PQRAGLRRCG KSCRLRWLNY  60
LRPNIKRGDI SDDEEELIVR LHGLLGNRWS IIAGRLPGRT DNEIKNYWNS TLGRKALPAR  120
PTIAAARTVV ATPVASGSSS STGSAAAPLS TSVPALLHAA APSSPAAAVW APKPVRCTGG  180
LFFRREQETP PPAPVVEETR AGGEEGDACS GSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.18e-58MYB family protein