PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG021780.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 77aa    MW: 8510.08 Da    PI: 11.7221
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG021780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF83.99.9e-271058250
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                      rie+   rqvtfskRr g++KKAeEL vLCda+va+++fsstgkl  ++
  TRIDC7AG021780.1 10 RIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFA 58
                      8*********************************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 77 aa     Download sequence    
MARERRAIRR IESAAARQVT FSKRRRGLFK KAEELAVLCD ADVALVVFSS TGKLSQFANL  60
SVLLVSPTRC GFGILLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-08MIKC_MADS family protein