PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG021780.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MIKC_MADS

Protein Properties

Length: 230aa MW: 25625.9 Da PI: 5.9096

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG021780.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	80.8	9.2e-26	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rie+ rqvtfskRr g++KKAeEL vLCda+va+++fsstgkl ++s TRIDC7AG021780.5 10 RIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFAS 59 8*********************************************9986 PP
2	K-box	51.7	3.8e-18	93	172	20	99
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++ L++++ + +Rh+ Ge+L+ Ls+ eLqq+e++Le++l+++ +K++ +++qi++lq+k +l een++L++++ TRIDC7AG021780.5 93 KYDSLNEQLAEASLRLRHMRGEELDGLSVGELQQMEKNLETGLQRVLCTKDRQFMQQISDLQQKGTQLAEENMRLKNQMH 172 5677888888888999************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MARERRAIRR IESAAARQVT FSKRRRGLFK KAEELAVLCD ADVALVVFSS TGKLSQFASS 60 SMNEIIDKYS THSKNLGKSD QQPAIDLNLE HCKYDSLNEQ LAEASLRLRH MRGEELDGLS 120 VGELQQMEKN LETGLQRVLC TKDRQFMQQI SDLQQKGTQL AEENMRLKNQ MHEVPTASTV 180 AVAEAENVVP EDAHSSDSVM TAVHSGSSQD NYDGSDISLK LAEPMCVCHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	9e-46	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG021780.5