PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG021780.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MIKC_MADS

Protein Properties

Length: 206aa MW: 22913.7 Da PI: 5.132

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG021780.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	63.2	2.8e-20	1	39	13	51
HHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 13 fskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 fskRr g++KKAeEL vLCda+va+++fsstgkl ++s TRIDC7AG021780.6 1 FSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFAS 39 9**********************************9986 PP
2	K-box	52.7	1.8e-18	73	152	20	99
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++ L++++ + +Rh+ Ge+L+ Ls+ eLqq+e++Le++l+++ +K++ +++qi++lq+k +l een++L++++ TRIDC7AG021780.6 73 KYDSLNEQLAEASLRLRHMRGEELDGLSVGELQQMEKNLETGLQRVLCTKDRQFMQQISDLQQKGTQLAEENMRLKNQMH 152 5677778887777899************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
FSKRRRGLFK KAEELAVLCD ADVALVVFSS TGKLSQFASS SMNEIIDKYS THSKNLGKSD 60 QQPAIDLNLE HCKYDSLNEQ LAEASLRLRH MRGEELDGLS VGELQQMEKN LETGLQRVLC 120 TKDRQFMQQI SDLQQKGTQL AEENMRLKNQ MHEVPTASTV AVAEAENVVP EDAHSSDSVM 180 TAVHSGSSQD NYDGSDISLK LALPWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	6e-45	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG021780.6