PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG024960.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 433aa MW: 47988.3 Da PI: 8.7139

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG024960.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	72.1	6.3e-23	67	132	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++f++l+ + + ++v l+++a++L v +rRRiYDi+NVLe+++++ +++kn+++w+g TRIDC7AG024960.1 67 RKQKSLGLLCSNFVALYDRDDVETVGLDDAARRL---GV--ERRRIYDIVNVLESVGILVRRAKNRYTWIG 132 79**************9999********.....****************************98 PP
2	E2F_TDP	78.6	5.6e-25	211	291	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL+lltq+f+kl+ + e ++v+l+e+a+ L+ e ++++k+RR+YDi+NVL++lnliek ++k+++rw g TRIDC7AG024960.1 211 RKEKSLGLLTQNFVKLFLTMEVETVSLDEAARLLLGErhaesNMRTKVRRLYDIANVLSSLNLIEKtqqvdSRKPAFRWLG 291 79**************************************************************9999999****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
KIRPSPPFPP RHPPAMEPAA AAGAPAAAAQ PPPPPPPPYL PPRLVIDGAG GGSGAAARAC 60 RHHAYSRKQK SLGLLCSNFV ALYDRDDVET VGLDDAARRL GVERRRIYDI VNVLESVGIL 120 VRRAKNRYTW IGFEGVPAAL KELKERTLRE MSGLAPPPEE PSAANVSDDE DDDDKLGDAE 180 GDADSEKLSQ SIDNASDKPD TPMCPRRSDH RKEKSLGLLT QNFVKLFLTM EVETVSLDEA 240 ARLLLGERHA ESNMRTKVRR LYDIANVLSS LNLIEKTQQV DSRKPAFRWL GQAKRKEGAT 300 VTVALPPARK IMSSKRAFGT DITNIDNKRG KLVLETENKP KLMQGGSSML KTFESQLGQG 360 KSSGFVYGPF HPAGARKHEV DDQSVRENET KNIQDWENLA VSFRPQYQNH ALNDLFGHYV 420 EAWKSWYLDL TRE

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

KIRPSPPFPP RHPPAMEPAA AAGAPAAAAQ PPPPPPPPYL PPRLVIDGAG GGSGAAARAC  60
RHHAYSRKQK SLGLLCSNFV ALYDRDDVET VGLDDAARRL GVERRRIYDI VNVLESVGIL  120
VRRAKNRYTW IGFEGVPAAL KELKERTLRE MSGLAPPPEE PSAANVSDDE DDDDKLGDAE  180
GDADSEKLSQ SIDNASDKPD TPMCPRRSDH RKEKSLGLLT QNFVKLFLTM EVETVSLDEA  240
ARLLLGERHA ESNMRTKVRR LYDIANVLSS LNLIEKTQQV DSRKPAFRWL GQAKRKEGAT  300
VTVALPPARK IMSSKRAFGT DITNIDNKRG KLVLETENKP KLMQGGSSML KTFESQLGQG  360
KSSGFVYGPF HPAGARKHEV DDQSVRENET KNIQDWENLA VSFRPQYQNH ALNDLFGHYV  420
EAWKSWYLDL TRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-107	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG024960.1