PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG025680.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 194aa MW: 20903.6 Da PI: 12.5077

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG025680.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	121.2	1.2e-37	29	160	2	128
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg...k 89 a +k +++++h+kv+g +RR+R+++ caar+F+L ++LG+++d++tieWLl+qa+p+i+++tg+++++as++ +++s + +s+++++ TRIDC7AG025680.3 29 AMRKASSKDRHSKVDGWGRRIRMPIICAARVFQLMRKLGHKSDGQTIEWLLRQAEPSIIAATGSGTTTASFStsSPSSLRPGVSHPHAHvqpL 121 679*************************************************************99999777667777777777666666666 PP TCP 90 aaksaakskksqksaasalnlakesrakarararertre 128 aa+ ++++++ +++aa + a+ r ++r+r+r rtr TRIDC7AG025680.3 122 AASPHHPHHHLPHDAALHPRQARPRRRRQRQRQRHRTRR 160 667777888888888877777777777888888877775 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
ERGGGDGMEN KQLVPVAATN GTNGGGALAM RKASSKDRHS KVDGWGRRIR MPIICAARVF 60 QLMRKLGHKS DGQTIEWLLR QAEPSIIAAT GSGTTTASFS TSSPSSLRPG VSHPHAHVQP 120 LAASPHHPHH HLPHDAALHP RQARPRRRRQ RQRQRHRTRR GGGNSGHGPR PGLLGAARAG 180 RLWAAVELRA ATGD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	144	151	RPRRRRQR
2	147	157	RRRQRQRQRHR
3	149	159	RRRQRQRQRHR
4	154	160	QRHRTRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08330.1	2e-28	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG025680.3