PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG025850.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 264aa    MW: 28971.9 Da    PI: 6.7797
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG025850.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.73.1e-141461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd++lv     +G  +W+ +++  g+ R++k+c++rw +yl
  TRIDC7AG025850.2 14 KGPWTAEEDQKLVGFLLTHGHYCWRVVPKLAGLLRCGKSCRLRWTNYL 61
                      79******************99**********99************97 PP
2Myb_DNA-binding46.96.4e-1570111447
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        + eE++l +d+++ql  + W++Ia+ ++ gRt++++k++w+++
  TRIDC7AG025850.2  70 LSDEEQQLVIDLHAQLARR-WSKIAAQLP-GRTDNEIKNHWNTH 111
                       589**************88.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MGRQPCCDKV GLKKGPWTAE EDQKLVGFLL THGHYCWRVV PKLAGLLRCG KSCRLRWTNY  60
LRPDLKRGLL SDEEQQLVID LHAQLARRWS KIAAQLPGRT DNEIKNHWNT HIKKKLRKMG  120
IDPVTHRPLG QEAPPPLQHP PPPPTATSWQ QLDGAERSQQ AEEEDVKAVP LIQPHEVTAV  180
PPTASSNCSV SPASVISPSC SSSSAASGLE AAEWPEPMYL LGMDGIMDVG SGWDAGFVVP  240
GGLGVDPFDH YYPDPAGFDQ GAWP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66230.19e-82MYB family protein