PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG026690.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 450aa MW: 48750.9 Da PI: 5.9945

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG026690.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.1	7.3e-09	284	332	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq TRIDC7AG026690.2 284 NSHSLAERVRREKISERMKFLQDLVPGC----SKVIGKAVMLDEIINYVQSLQ 332 58***********************9....566***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
FRSSRSDRSE METNEKNAAD LEDKNQPSGH GQQPSFHGPG FSLSPEAQMD SSSSALAAMG 60 NPFPPGLWNP PGQNFGLGET NTNAMLNGHQ FSSFLGMLSA ATPAYPGAQS GFMDCGAGFP 120 GLSANSLGAM MDHPFSRNPA MGSFQNDIET SREMNVDEGC KDALLTGDRQ QGDTESSHGV 180 DASSKELSKP ECSGGAGQDE GPSVSCPKKR KRPSQDRGVK HVQEGSQQLA TLAAKQEKDD 240 DDKDEPKRPV GTSRKSNGKQ TEDKSDAPKE DYIHIRARSG QATNSHSLAE RVRREKISER 300 MKFLQDLVPG CSKVIGKAVM LDEIINYVQS LQRQVEFLSM KLSAVNPALD FNIERILSKD 360 LFQSQGTASS TFGFLPDIGH QFLHPPKHSQ AALHSIVNPA DAFGRVTNAP VGCTFKEATH 420 QVPNNFDGEF HNVIGMPFTL FNDHESNDKP

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

FRSSRSDRSE METNEKNAAD LEDKNQPSGH GQQPSFHGPG FSLSPEAQMD SSSSALAAMG  60
NPFPPGLWNP PGQNFGLGET NTNAMLNGHQ FSSFLGMLSA ATPAYPGAQS GFMDCGAGFP  120
GLSANSLGAM MDHPFSRNPA MGSFQNDIET SREMNVDEGC KDALLTGDRQ QGDTESSHGV  180
DASSKELSKP ECSGGAGQDE GPSVSCPKKR KRPSQDRGVK HVQEGSQQLA TLAAKQEKDD  240
DDKDEPKRPV GTSRKSNGKQ TEDKSDAPKE DYIHIRARSG QATNSHSLAE RVRREKISER  300
MKFLQDLVPG CSKVIGKAVM LDEIINYVQS LQRQVEFLSM KLSAVNPALD FNIERILSKD  360
LFQSQGTASS TFGFLPDIGH QFLHPPKHSQ AALHSIVNPA DAFGRVTNAP VGCTFKEATH  420
QVPNNFDGEF HNVIGMPFTL FNDHESNDKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	207	213	PKKRKRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	5e-65	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG026690.2