PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG027190.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YB

Protein Properties

Length: 272aa MW: 28737.1 Da PI: 5.3901

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG027190.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	147.6	2.7e-46	19	113	1	95
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 vreqdr++Pianv+rim+++lPa+akis++ake +qecvsefisfvt+ea+++c+ ++rkt+n++d++wal lGf+dyv pl+v+l++ r+ TRIDC7AG027190.1 19 VREQDRLMPIANVIRIMRRALPAHAKISDEAKEAIQECVSEFISFVTGEANERCRMQRRKTVNAEDIVWALNRLGFDDYVVPLSVFLERMRNP 111 69*****************************************************************************************97 PP NF-YB 94 eg 95 e+ TRIDC7AG027190.1 112 EA 113 75 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
DGVPNGPAAP APTQATPEVR EQDRLMPIAN VIRIMRRALP AHAKISDEAK EAIQECVSEF 60 ISFVTGEANE RCRMQRRKTV NAEDIVWALN RLGFDDYVVP LSVFLERMRN PEAGTGGAAA 120 GYSRAVTSAP PRAAPPVIHA VPLQARPPAP VQAHNQMQRP VYAPPAPVQV QMQQGIYGPR 180 APVHGYAVGM APVRANVGGQ YQVFGGERVM GQQYYGYGYG EGAYGAGSSN GGAGIGDEES 240 SSNGVPAPGE GKGEPEPEPA AEESQDKPVQ SG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.2	1e-49	NF-YB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG027190.1