PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG029300.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 229aa MW: 24581.5 Da PI: 6.3368

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG029300.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	127.4	6.4e-40	23	123	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 +C aCk+lrrkCa+dC++apyf +eq ++f +vhk+FGasnv+k+l+++p+++r da+ +++yeA+ar+rdP+yG+vg i++lqq++++l+a TRIDC7AG029300.1 23 PCGACKFLRRKCADDCIFAPYFDSEQgVEHFTAVHKVFGASNVSKILNQAPPHKRLDAAITVCYEAKARLRDPIYGCVGDIFALQQRVANLQA 115 7*********************9977************************************************************* PP DUF260 93 elallkee 100 e+a l+++ TRIDC7AG029300.1 116 EVAFLQAH 123 *99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MSGSSTSASV SVGGRPSGCS GGPCGACKFL RRKCADDCIF APYFDSEQGV EHFTAVHKVF 60 GASNVSKILN QAPPHKRLDA AITVCYEAKA RLRDPIYGCV GDIFALQQRV ANLQAEVAFL 120 QAHLTTPQQP SPPPFLSPPY IPMTTEFSIS ELASLSNVPN TIELSSLFDP SMQWAFQQQH 180 QQPYGQTGEG SGGTGNTNSN GDDLQALARE LLDRRSTGLT PQQPSNTQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00220.1	3e-55	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG029300.1