PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG032340.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 219aa MW: 24324.5 Da PI: 10.7682

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG032340.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.5	6.3e-13	14	59	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+WT+eEde l + v+++G++ W++I ++ + Rt+k+c++rw + TRIDC7AG032340.1 14 KGPWTAEEDEVLHQHVREHGPREWSSIRSKGLLPRTGKSCRLRWVN 59 79***********************8876677********87 PP
2	Myb_DNA-binding	44	5.3e-14	70	110	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++ eE+ +d+ +q+G++ W++Ia +++ gRt++++k++w TRIDC7AG032340.1 70 KFSSEEERVVIDLQAQFGNK-WARIATYLP-GRTDNDVKNFWS 110 79****************.*****.*********5 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MQPRGGGDRA AVRKGPWTAE EDEVLHQHVR EHGPREWSSI RSKGLLPRTG KSCRLRWVNK 60 LRPDLKTGCK FSSEEERVVI DLQAQFGNKW ARIATYLPGR TDNDVKNFWS TRQKRLARIL 120 RAPLPRRRSA SAATAKHSGN GGGGVGAASS SAASNSHEAA AARASEVTLF SCLLSLKKNR 180 DGFVASELDS DHPVSEPDFV PLFFPEMIER HLFLLNWAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	1e-59	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG032340.1