PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG033130.12

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 304aa MW: 32380.6 Da PI: 10.3651

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG033130.12	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.8	9.2e-09	184	231	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L++l+P + +k Ka +L + ++Y++sLq TRIDC7AG033130.12 184 SHSLAERVRRERISQRMKFLQDLVPGC----NKVIGKALMLDEIINYVQSLQ 231 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
GRAGGGGSGD YITSLLTSSP MLDFGVLDGA VAAGGDCLDK FCGDPGFAER AARLSSFNGQ 60 HFAPGLFGMP PPGEFGGSRE ASSVSDPASA MKDANAKKRK APAGKGKAKE PSLSVGEQKE 120 ADGKRCRTGD AEKKVKPKAE QAGSDSSVED GEQRKGGKGK NAKPAEPPKD YVHVRARRGQ 180 ATDSHSLAER VRRERISQRM KFLQDLVPGC NKVIGKALML DEIINYVQSL QRQVEFLSMK 240 LATVNPLDFS NLPTLLHKDV SSKCTAHRRA RCSRWRAPAR PSRSATKETS SSPSCPAAWR 300 ASAP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	136	KKRKAPAGKGKAKEPSLSVGEQKEADGKRCRTGDAEKKVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	5e-53	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG033130.12