PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG033890.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 164aa    MW: 18664.1 Da    PI: 4.9703
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG033890.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF849.4e-27654250
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                      rie+ + rqv fskRr g++KKA+ELSvLCdaeva+++fs+ g+lye+ 
  TRIDC7AG033890.6  6 RIEDRTSRQVRFSKRRSGLFKKAFELSVLCDAEVALVVFSPAGRLYEFV 54
                      8***********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
RVELRRIEDR TSRQVRFSKR RSGLFKKAFE LSVLCDAEVA LVVFSPAGRL YEFVSSDTSV  60
EQIFGRCKDI PDTIIDDLNI AARDSRGYCN IQLDLNEQSV PESVSELNSF AQMALELDVK  120
EMSMAELTRF EEIVREALAA VKARLRRDPQ KKGDNWSGQE SGKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11880.15e-26MIKC_MADS family protein