PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG035420.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 437aa MW: 46971.6 Da PI: 7.3381

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG035420.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.7	2.4e-35	95	186	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d++++++iswse+g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ F++g+k+ll TRIDC7AG035420.1 95 FLNKTYQLVDDPAVDDVISWSEDGSAFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANDCFRRGEKRLL 178 9***************************************************************99.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i+r+k TRIDC7AG035420.1 179 CDIHRRKV 186 ***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
LRNCRCLPYS SVPSSRRVSV SNFLASLHAT LSGTFRKVAL TPPLPCRPTV SPGQICAVGG 60 GGVMGEQAAA VSSGETPATA EVGTGLGQRS LPTPFLNKTY QLVDDPAVDD VISWSEDGSA 120 FIVWRPAEFA RDLLPKYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANDCF RRGEKRLLCD 180 IHRRKVTPTV AATAAVTVAA AAAIPVALPV AKRQGSPVLS GDEQVLSSSS SPEPPFLNQY 240 APSYSGSGGV ASGDLGEENE RLRRENSRLT RELGQMKKLC NNIFVLMSKY TDGQQTDAAN 300 ATSAAADVGN CSGESAETTA LPPPPVLELL PSCQNAPTAA DLGAEDEEEK MSARLFGVCI 360 GRKRMRHDGE DRTRRGAAAE VKPEPMDAQQ PSGMDGHTPD VQAWPIYRPR PVYQPLRASD 420 GSNCYSGSDD HNGSNSR

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

LRNCRCLPYS SVPSSRRVSV SNFLASLHAT LSGTFRKVAL TPPLPCRPTV SPGQICAVGG  60
GGVMGEQAAA VSSGETPATA EVGTGLGQRS LPTPFLNKTY QLVDDPAVDD VISWSEDGSA  120
FIVWRPAEFA RDLLPKYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANDCF RRGEKRLLCD  180
IHRRKVTPTV AATAAVTVAA AAAIPVALPV AKRQGSPVLS GDEQVLSSSS SPEPPFLNQY  240
APSYSGSGGV ASGDLGEENE RLRRENSRLT RELGQMKKLC NNIFVLMSKY TDGQQTDAAN  300
ATSAAADVGN CSGESAETTA LPPPPVLELL PSCQNAPTAA DLGAEDEEEK MSARLFGVCI  360
GRKRMRHDGE DRTRRGAAAE VKPEPMDAQQ PSGMDGHTPD VQAWPIYRPR PVYQPLRASD  420
GSNCYSGSDD HNGSNSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	2e-57	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG035420.1