PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG035560.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SRS

Protein Properties

Length: 184aa MW: 19243.9 Da PI: 9.2543

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG035560.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	113.1	4.1e-35	100	171	3	80
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelks 80 +gt+sCqdCGnqakkdC h+RCRtCCksrgfdCathvkstWvpaa+rrer++q+ + +++ ++ kr+re + TRIDC7AG035560.3 100 AGTISCQDCGNQAKKDCPHMRCRTCCKSRGFDCATHVKSTWVPAARRRERHHQQPQGQTS------AEPFKRPREAGQ 171 6899**********************************************8777665443......445555555422 PP

Sequence ? help Back to Top
Protein Sequence Length: 184 aa Download sequence
GFPLGGGGHH SRGGRDDDGS HPPGINPSSS SSAAAFLYAT TPSRGGFQLW QGQPQPQHEQ 60 QHHQFYGGAS SSIIRFADDP AASGSSSRGG GRGSGAGAGA GTISCQDCGN QAKKDCPHMR 120 CRTCCKSRGF DCATHVKSTW VPAARRRERH HQQPQGQTSA EPFKRPREAG QPSSTTPTTT 180 SSVC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19790.1	1e-28	SRS family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG035560.3