PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG041840.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 182aa    MW: 19461.9 Da    PI: 9.7299
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG041840.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.71.1e-073879240
                      SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS
   Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40
                      g WT +E ell +   +++ g   +W++Ia+ +g +Rt++++
  TRIDC7AG041840.3 38 GEWTDQEMELLRRQMLKHPAGepqRWEKIAAVFGGRRTPESV 79
                      78********************************99999987 PP
2Myb_DNA-binding21.94e-07125168243
                       SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksr 43 
                       g W++ Ed  l++a k+++++   +W+++a+ ++ g+t   c  r
  TRIDC7AG041840.3 125 GGWSAGEDRSLLNALKEFPKDtamRWEKVAAAVP-GKTKAGCMKR 168
                       56********************************.***9888776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
PKSSDPVAPP VQPPPLRQEA MGAGTAVLDG GEREEEVGEW TDQEMELLRR QMLKHPAGEP  60
QRWEKIAAVF GGRRTPESVI RAAKSGGATA AGGSFEQFLR KRKPLDPRAG AADADTGGNA  120
GGGDGGWSAG EDRSLLNALK EFPKDTAMRW EKVAAAVPGK TKAGCMKRVT ELKRDFRSSK  180
EP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
199104LRKRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45420.14e-41MYB_related family protein