PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG042530.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 343aa MW: 37717.4 Da PI: 6.4569

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG042530.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.1	1.8e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+lv++++ +G g+W+ ++++ g+ R++k+c++rw +yl TRIDC7AG042530.3 14 RGLWSPEEDEKLVRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	55.3	1.5e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+++eE++l++ +++ G++ W+ Ia++++ gRt++++k++w+++ TRIDC7AG042530.3 67 RGRFSPEEEKLIISLHAIVGNR-WAHIASHLP-GRTDNEIKNYWNSW 111 89******************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MGHHSCCNQQ KVKRGLWSPE EDEKLVRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY 60 LRPDIRRGRF SPEEEKLIIS LHAIVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKAP 120 AVPNVTTTSS TTSTSPPNNG LAPCSGSTAT SDVHHRRLQH PTFSCAPAGD HLQLDAIIGH 180 HQSTSLALPV AAGAGQDSPP GMSHHCPLFM FDTSVVSTPF ASAAAQQHPF IASFTAAMAE 240 ADTPSCYHLP PLVDGMGAMG MCMEAMDDHC GAGAGMGNGC FGDEQRQRRR PGLEEEEGEQ 300 LGQHEQWDEE QLLMWDDQEV LTPSNMEAMQ SGEHSLLFMG PNA

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MGHHSCCNQQ KVKRGLWSPE EDEKLVRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY  60
LRPDIRRGRF SPEEEKLIIS LHAIVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKAP  120
AVPNVTTTSS TTSTSPPNNG LAPCSGSTAT SDVHHRRLQH PTFSCAPAGD HLQLDAIIGH  180
HQSTSLALPV AAGAGQDSPP GMSHHCPLFM FDTSVVSTPF ASAAAQQHPF IASFTAAMAE  240
ADTPSCYHLP PLVDGMGAMG MCMEAMDDHC GAGAGMGNGC FGDEQRQRRR PGLEEEEGEQ  300
LGQHEQWDEE QLLMWDDQEV LTPSNMEAMQ SGEHSLLFMG PNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63910.1	4e-85	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG042530.3