PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG042690.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 383aa    MW: 40867.3 Da    PI: 9.7445
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG042690.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.28e-1393137347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +W++eE+++++ + ++lG+g+W+ I+r     Rt+ q+ s+ qky
  TRIDC7AG042690.3  93 SWSEEEHKKFLLGLNKLGKGDWRGISRNYVVSRTPTQVASHAQKY 137
                       7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MTRDGVPPAA PAGGGAGDGP RRCSQCGHHG HNSRTCTARP VKLFGVRIGD KPIRKSVSMD  60
NLAQLAEGSG GARAEGYGSE GDDDKPHRKR GESWSEEEHK KFLLGLNKLG KGDWRGISRN  120
YVVSRTPTQV ASHAQKYFIR QTNVNRRKRR SSLFDMPLSR SSSQEMPLSR SSSQDVEEFV  180
DDLRPVTAPV TPPAPMPVIT SVSVPPPVPV MAPPAPVPML TYASAPSPVL AMAHQPQGNE  240
SAGSSSIAGE AGMVMPQVMP PYGYPPPMMI PAPHYVQAVF PYPYYGYAPM FYGPPVSMQA  300
SSPVTVQASH EPVRPVAVHS APPVNVEDLY NMSKLNLKGD SSTSGVAPNL ALPPNPNGRP  360
ERQSAFHGKG AENGSSNGLI PTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.15e-45MYB_related family protein