PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG042930.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 251aa    MW: 28062.7 Da    PI: 10.3719
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG042930.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.81.1e-0984132354
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       +++  rE+ RRd++N++f eL + l +    +  K +Ka+iL  A++ + +L
  TRIDC7AG042930.2  84 TSKACREKVRRDKLNDRFLELGTTLDPG---KPVKADKAAILSDATRMVTQL 132
                       67889**********************9...99**************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
VSPSDRRRRR LVPRLRHPRG PPGRCLRCFP VGRIRLLVQS KVSPALPAAQ LFCAEVGSHV  60
NKLDLPKDSG SNKRLRSEPC GRPTSKACRE KVRRDKLNDR FLELGTTLDP GKPVKADKAA  120
ILSDATRMVT QLRAEAQQLK DTNGSLEDKI KELKAEKDEL RDEKQKLKLE KETLEHQMKL  180
LTATPAYMPH PTMMPSPFAQ APMAPFHAQG QALGQKLMMP FVGYPGYPMW QLMPPSEVDT  240
SKDSEACPPV A
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1815RRRLVPRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-57bHLH family protein