PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG043490.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 562aa MW: 58484 Da PI: 6.0324

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG043490.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.8	1.5e-11	376	418	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L TRIDC7AG043490.1 376 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 418 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
LRSHLLSSVL LCHLCDSAAC QLLPRPLPHQ KTSPRAAISA TMLSRFNNSL WMQEDDGHEQ 60 QGLGHEQPPA MGQEAGHHHD QHLLAMPTGG GGGFRAPSML DEDWYFGAGA VGDGAANGSM 120 ALVLAAMEAS GSSSGFGAGP QMFPLLNLGG TGPFDVSGFD LGGSGTGGGD LTAFLGAGNA 180 SNTSPVSLLP HRNTGFLGSF GGFGTAPAQM TEFGGLAGFD LFDTGAGGGG GGGSGSSSEG 240 PAAPVSLTAP FSGRGKAAVL RPLEIFPPVG AQPTLFQKRA LRRNAGEEDD DRKRKAAVAA 300 EGSALSAGCD TMLDDADEDM GSIDASGLNY DSEDGRDVEE SGRKDGKESN ANSTVTGGAA 360 AEGKGKKKGM PAKNLMAERR RRKKLNDRLY MLRSVVPKIS KMDRASILGD AIEYLKELLH 420 KISNLQNELE SSPSMPSLPP TPTSFHPVTP TLPALPSRVK EELCPSALPS PTGQQPTVEV 480 RLREGRAVNI HMLCPRRPGL VLSAMKAIEA LGLDVQQAVI SCFNGFALDV FKAEQCKDGP 540 GLQPEEIKAV LLQSAGFHLP AM

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

LRSHLLSSVL LCHLCDSAAC QLLPRPLPHQ KTSPRAAISA TMLSRFNNSL WMQEDDGHEQ  60
QGLGHEQPPA MGQEAGHHHD QHLLAMPTGG GGGFRAPSML DEDWYFGAGA VGDGAANGSM  120
ALVLAAMEAS GSSSGFGAGP QMFPLLNLGG TGPFDVSGFD LGGSGTGGGD LTAFLGAGNA  180
SNTSPVSLLP HRNTGFLGSF GGFGTAPAQM TEFGGLAGFD LFDTGAGGGG GGGSGSSSEG  240
PAAPVSLTAP FSGRGKAAVL RPLEIFPPVG AQPTLFQKRA LRRNAGEEDD DRKRKAAVAA  300
EGSALSAGCD TMLDDADEDM GSIDASGLNY DSEDGRDVEE SGRKDGKESN ANSTVTGGAA  360
AEGKGKKKGM PAKNLMAERR RRKKLNDRLY MLRSVVPKIS KMDRASILGD AIEYLKELLH  420
KISNLQNELE SSPSMPSLPP TPTSFHPVTP TLPALPSRVK EELCPSALPS PTGQQPTVEV  480
RLREGRAVNI HMLCPRRPGL VLSAMKAIEA LGLDVQQAVI SCFNGFALDV FKAEQCKDGP  540
GLQPEEIKAV LLQSAGFHLP AM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	366	384	KKKGMPAKNLMAERRRRKK
2	378	385	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	2e-95	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG043490.1