PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG047670.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 486aa MW: 52834.2 Da PI: 7.524

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG047670.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	43.9	4.8e-14	59	98	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 +kk+CnCk+s+Clk+YCeCfaag +C+ C+C++C Nk e+ TRIDC7AG047670.2 59 RKKQCNCKNSHCLKLYCECFAAGLYCDG-CNCKQCGNKVEN 98 689***********************.******9875 PP
2	TCR	50.4	4.5e-16	141	180	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cs++CkC dCkN e TRIDC7AG047670.2 141 KHNKGCHCKKSGCLKKYCECFQANILCSKNCKCMDCKNFE 180 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MEPEQQHNAQ PPAPPAAAPP HPPQPRPVAP MMHSARSWPL SFTPIKPLVE IKSVTPPKRK 60 KQCNCKNSHC LKLYCECFAA GLYCDGCNCK QCGNKVENEH ARQEAINSTK LRNPKAFQPK 120 IENVPSALSV RKDAGAPSVP KHNKGCHCKK SGCLKKYCEC FQANILCSKN CKCMDCKNFE 180 GSEELQAIIQ GDNASDKNNI QQAANVTLNG AIGSSGYKYS PVRRKRHPED PLGPEANHLD 240 ASQVASSSGL EGCIGYQSRS KMVYRSPLAN TIHPTDVNDL ANHLVIVCRK ATETFLTIAD 300 NKVEMEVERG IYTNADLNND KMKNREVQNG GVSQPDVATH IDQRTAGDLE SPCNNTQEDY 360 RPASPGTQAL LCDEQGTTFG SDYRTSFPSA FHDQDTPELS ALQEKTVLTG FRDYLRLLIT 420 RGKINANNSA GMTEANASSE PAMELDAQRN HGATTGPGAS SFPPEAVERP KAPGDPENPR 480 AGDPSA

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MEPEQQHNAQ PPAPPAAAPP HPPQPRPVAP MMHSARSWPL SFTPIKPLVE IKSVTPPKRK  60
KQCNCKNSHC LKLYCECFAA GLYCDGCNCK QCGNKVENEH ARQEAINSTK LRNPKAFQPK  120
IENVPSALSV RKDAGAPSVP KHNKGCHCKK SGCLKKYCEC FQANILCSKN CKCMDCKNFE  180
GSEELQAIIQ GDNASDKNNI QQAANVTLNG AIGSSGYKYS PVRRKRHPED PLGPEANHLD  240
ASQVASSSGL EGCIGYQSRS KMVYRSPLAN TIHPTDVNDL ANHLVIVCRK ATETFLTIAD  300
NKVEMEVERG IYTNADLNND KMKNREVQNG GVSQPDVATH IDQRTAGDLE SPCNNTQEDY  360
RPASPGTQAL LCDEQGTTFG SDYRTSFPSA FHDQDTPELS ALQEKTVLTG FRDYLRLLIT  420
RGKINANNSA GMTEANASSE PAMELDAQRN HGATTGPGAS SFPPEAVERP KAPGDPENPR  480
AGDPSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	3e-87	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG047670.2