PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG047670.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 460aa MW: 50010.1 Da PI: 7.7708

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG047670.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44	4.4e-14	33	72	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 +kk+CnCk+s+Clk+YCeCfaag +C+ C+C++C Nk e+ TRIDC7AG047670.3 33 RKKQCNCKNSHCLKLYCECFAAGLYCDG-CNCKQCGNKVEN 72 689***********************.******9875 PP
2	TCR	50.5	4.2e-16	115	154	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cs++CkC dCkN e TRIDC7AG047670.3 115 KHNKGCHCKKSGCLKKYCECFQANILCSKNCKCMDCKNFE 154 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
APPHPPQPRP VAPMMHSARK PLVEIKSVTP PKRKKQCNCK NSHCLKLYCE CFAAGLYCDG 60 CNCKQCGNKV ENEHARQEAI NSTKLRNPKA FQPKIENVPS ALSVRKDAGA PSVPKHNKGC 120 HCKKSGCLKK YCECFQANIL CSKNCKCMDC KNFEGSEELQ AIIQGDNASD KNNIQQAANV 180 TLNGAIGSSG YKYSPVRRKR HPEDPLGPEA NHLDASQVAS SSGLEGCIGY QSRSKMVYRS 240 PLANTIHPTD VNDLANHLVI VCRKATETFL TIADNKVEME VERGIYTNAD LNNDKMKNRE 300 VQNGGVSQPD VATHIDQRTA GDLESPCNNT QEDYRPASPG TQALLCDEQG TTFGSDYRTS 360 FPSAFHDQDT PELSALQEKT VLTGFRDYLR LLITRGKINA NNSAGMTEAN ASSEPAMELD 420 AQRNHGATTG PGASSFPPEA VERPKAPGDP ENPRAGDPSA

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

APPHPPQPRP VAPMMHSARK PLVEIKSVTP PKRKKQCNCK NSHCLKLYCE CFAAGLYCDG  60
CNCKQCGNKV ENEHARQEAI NSTKLRNPKA FQPKIENVPS ALSVRKDAGA PSVPKHNKGC  120
HCKKSGCLKK YCECFQANIL CSKNCKCMDC KNFEGSEELQ AIIQGDNASD KNNIQQAANV  180
TLNGAIGSSG YKYSPVRRKR HPEDPLGPEA NHLDASQVAS SSGLEGCIGY QSRSKMVYRS  240
PLANTIHPTD VNDLANHLVI VCRKATETFL TIADNKVEME VERGIYTNAD LNNDKMKNRE  300
VQNGGVSQPD VATHIDQRTA GDLESPCNNT QEDYRPASPG TQALLCDEQG TTFGSDYRTS  360
FPSAFHDQDT PELSALQEKT VLTGFRDYLR LLITRGKINA NNSAGMTEAN ASSEPAMELD  420
AQRNHGATTG PGASSFPPEA VERPKAPGDP ENPRAGDPSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	3e-87	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG047670.3