PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG047670.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 401aa MW: 44065.5 Da PI: 7.7587

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG047670.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.2	3.7e-14	14	53	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 +kk+CnCk+s+Clk+YCeCfaag +C+ C+C++C Nk e+ TRIDC7AG047670.4 14 RKKQCNCKNSHCLKLYCECFAAGLYCDG-CNCKQCGNKVEN 53 689***********************.******9875 PP
2	TCR	50.7	3.5e-16	96	135	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cs++CkC dCkN e TRIDC7AG047670.4 96 KHNKGCHCKKSGCLKKYCECFQANILCSKNCKCMDCKNFE 135 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
KPLVEIKSVT PPKRKKQCNC KNSHCLKLYC ECFAAGLYCD GCNCKQCGNK VENEHARQEA 60 INSTKLRNPK AFQPKIENVP SALSVRKDAG APSVPKHNKG CHCKKSGCLK KYCECFQANI 120 LCSKNCKCMD CKNFEGSEEL QAIIQGDNAS DKNNIQQAAN VTLNGAIGSS GYKYSPVRRK 180 RHPEDPLGPE ANHLDASQVA SSSGLEGCIG YQSRSKMVYR SPLANTIHPT DVNDLANHLV 240 IVCRKATETF LTIADNKVEM EVERGIYTNA DLNNDKMKNR EVQNGGVSQP DVATHIDQRT 300 AGDLESPCNN TQEDYRPASP GTQALLCDEQ GTTFGSDYRT SFPSAFHDQD TPELSALQEK 360 TVLTGFRDYL RLLITRGKIN EANASSEPAM ELDAQRNHGA T

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

KPLVEIKSVT PPKRKKQCNC KNSHCLKLYC ECFAAGLYCD GCNCKQCGNK VENEHARQEA  60
INSTKLRNPK AFQPKIENVP SALSVRKDAG APSVPKHNKG CHCKKSGCLK KYCECFQANI  120
LCSKNCKCMD CKNFEGSEEL QAIIQGDNAS DKNNIQQAAN VTLNGAIGSS GYKYSPVRRK  180
RHPEDPLGPE ANHLDASQVA SSSGLEGCIG YQSRSKMVYR SPLANTIHPT DVNDLANHLV  240
IVCRKATETF LTIADNKVEM EVERGIYTNA DLNNDKMKNR EVQNGGVSQP DVATHIDQRT  300
AGDLESPCNN TQEDYRPASP GTQALLCDEQ GTTFGSDYRT SFPSAFHDQD TPELSALQEK  360
TVLTGFRDYL RLLITRGKIN EANASSEPAM ELDAQRNHGA T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	2e-88	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG047670.4