PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG049640.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 268aa    MW: 28484 Da    PI: 7.672
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG049640.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind104.68.4e-33171072101
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       F+ k+y+++ed+ ++ +i w + +nsfvv d+  f++++Lp +Fkh+nf+SFvRQLn+YgF+kv+ ++         weF+h sF +g+++ll
  TRIDC7AG049640.2  17 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFAHGSFLRGQTHLL 100
                       9****************************************************************999.........**************** PP

                       XXXXXXX CS
      HSF_DNA-bind  95 ekikrkk 101
                       ++i r+ 
  TRIDC7AG049640.2 101 RNIVRRG 107
                       ****996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
RPMAAAAASV GGGAAPFVWK TYRMVEDPGT DGVIGWGKGN NSFVVADPFV FSQTMLPAHF  60
KHNNFSSFVR QLNTYGFRKV DPDRWEFAHG SFLRGQTHLL RNIVRRGTAV GGGGGGKRKD  120
AVAAGLTDDD MTMVATEVVR LKKEQNTIDD RVAAMWRRVQ ETERKPKQML AFLLTVVGDR  180
DTLQRLVGNS GNAAGGEQGP VEGGEKRARM LLDGDFGNVS AFGPDAVDFA GFYTDDAFAS  240
VPVPVEAAAG PGGGGAGCTF AFGVDSGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.18e-56HSF family protein