PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG049970.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 385aa MW: 42760 Da PI: 9.512

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG049970.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	57.6	4.4e-18	21	125	56	128
NAM 56 kewyfFskrdkkyatgkrknra...............................tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapk 115 + +fF++ +k+y+tg+rk+r+ ++ +W++tgk+++v + +g++ g+kk+Lv+y g+++k TRIDC7AG049970.1 21 LSRHFFHRPSKAYTTGTRKRRKiqppatvdasalssagsvaagaahqqqqqqqRSETRWHKTGKTRPVAV-GGRQRGCKKILVLYtnFGKHRK 112 367****************88*********************9998755789********.99********55479999 PP NAM 116 gektdWvmheyrl 128 +ekt+Wvmh+y+l TRIDC7AG049970.1 113 PEKTNWVMHQYHL 125 99*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
GWHARPDIHG HAHAGLSKDG LSRHFFHRPS KAYTTGTRKR RKIQPPATVD ASALSSAGSV 60 AAGAAHQQQQ QQQRSETRWH KTGKTRPVAV GGRQRGCKKI LVLYTNFGKH RKPEKTNWVM 120 HQYHLGESEE EREGELVVSK IFYQTQPRQC GVGDGASASV PASSTGTFAM ERRRADGAGR 180 SRAVRMTPSD MVNAAFHGTT RIQDFSFSQF RNNIEEVGMG GSDHQVVQVR ADEGVLHRPA 240 SLHHQHPDQQ QHHVVDEHDH RRHHHHYAGL QQEHHHSSTA AFHVSTPTDP IATLIAAPPV 300 HQGSVVLAAP TAEPYGHGAP SYHNQEDERP HQTRKFDGRS TSGLEEVIMG CTSRRSKGGE 360 TSGSKEDTEW QYPSFWPSDN QDHHG

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

GWHARPDIHG HAHAGLSKDG LSRHFFHRPS KAYTTGTRKR RKIQPPATVD ASALSSAGSV  60
AAGAAHQQQQ QQQRSETRWH KTGKTRPVAV GGRQRGCKKI LVLYTNFGKH RKPEKTNWVM  120
HQYHLGESEE EREGELVVSK IFYQTQPRQC GVGDGASASV PASSTGTFAM ERRRADGAGR  180
SRAVRMTPSD MVNAAFHGTT RIQDFSFSQF RNNIEEVGMG GSDHQVVQVR ADEGVLHRPA  240
SLHHQHPDQQ QHHVVDEHDH RRHHHHYAGL QQEHHHSSTA AFHVSTPTDP IATLIAAPPV  300
HQGSVVLAAP TAEPYGHGAP SYHNQEDERP HQTRKFDGRS TSGLEEVIMG CTSRRSKGGE  360
TSGSKEDTEW QYPSFWPSDN QDHHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	8e-48	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG049970.1