PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG049970.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 484aa MW: 53136.5 Da PI: 7.3678

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG049970.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	103.1	3.7e-32	54	224	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk........lelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra 77 lp+G++F+Ptd+el+ e+L++kv++ + +i+ +i++++P++Lp ++++ + +fF++ +k+y+tg+rk+r+ TRIDC7AG049970.3 54 LPAGVKFDPTDQELI-EHLEAKVQSGGtaavaapsH---PlidefipTIEGEdGICYTHPEKLP-GLSKDGLSRHFFHRPSKAYTTGTRKRRK 141 799**********.99**999665555551...055555444776646******.555666799**************8 PP NAM 78 ...............................tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++ +W++tgk+++v + +g++ g+kk+Lv+y g+++k+ekt+Wvmh+y+l TRIDC7AG049970.3 142 iqppatvdasalssagsvaagaahqqqqqqqRSETRWHKTGKTRPVAV-GGRQRGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 224 8*********************9998755789********.99********5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MDDGATATTG GGTSSGGHHL IGSRIEEHGK YMSESSCCPR CGHKIDQKLD WVGLPAGVKF 60 DPTDQELIEH LEAKVQSGGT AAVAAPSHPL IDEFIPTIEG EDGICYTHPE KLPGLSKDGL 120 SRHFFHRPSK AYTTGTRKRR KIQPPATVDA SALSSAGSVA AGAAHQQQQQ QQRSETRWHK 180 TGKTRPVAVG GRQRGCKKIL VLYTNFGKHR KPEKTNWVMH QYHLGESEEE REGELVVSKI 240 FYQTQPRQCG VGDGASASVP ASSTGTFAME RRRADGAGRS RAVRMTPSDM VNAAFHGTTR 300 IQDFSFSQFR NNIEEVGMGG SDHQVVQVRA DEGVLHRPAS LHHQHPDQQQ HHVVDEHDHR 360 RHHHHYAGLQ QEHHHSSTAA FHVSTPTDPI ATLIAAPPVH QGSVVLAAPT AEPYGHGAPS 420 YHNQEDERPH QTRKFDGRST SGLEEVIMGC TSRRSKGGET SGSKEDTEWQ YPSFWPSDNQ 480 DHHG

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MDDGATATTG GGTSSGGHHL IGSRIEEHGK YMSESSCCPR CGHKIDQKLD WVGLPAGVKF  60
DPTDQELIEH LEAKVQSGGT AAVAAPSHPL IDEFIPTIEG EDGICYTHPE KLPGLSKDGL  120
SRHFFHRPSK AYTTGTRKRR KIQPPATVDA SALSSAGSVA AGAAHQQQQQ QQRSETRWHK  180
TGKTRPVAVG GRQRGCKKIL VLYTNFGKHR KPEKTNWVMH QYHLGESEEE REGELVVSKI  240
FYQTQPRQCG VGDGASASVP ASSTGTFAME RRRADGAGRS RAVRMTPSDM VNAAFHGTTR  300
IQDFSFSQFR NNIEEVGMGG SDHQVVQVRA DEGVLHRPAS LHHQHPDQQQ HHVVDEHDHR  360
RHHHHYAGLQ QEHHHSSTAA FHVSTPTDPI ATLIAAPPVH QGSVVLAAPT AEPYGHGAPS  420
YHNQEDERPH QTRKFDGRST SGLEEVIMGC TSRRSKGGET SGSKEDTEWQ YPSFWPSDNQ  480
DHHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	8e-95	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG049970.3