PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG050670.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 356aa    MW: 38143.4 Da    PI: 8.5715
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG050670.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.71.4e-17177210134
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                       Cs C+ttkTplWR+gp g+k+LCnaCG+++rk +
  TRIDC7AG050670.2 177 CSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKAR 210
                       *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MSTIYMSQLS TSFPLMEEDH HQDHHQGHFQ AFTLPKDPPI LFPFVISNSS PSDNSSLGYG  60
SDQHLMQHHA MLDQPQHMIG GSSSVFSTPF PTVESIRDDM IERSYSYDPY DMEKLQATSG  120
GSLKIGKWAA PAPAAKMRIT RKTSDPGVKK PRKRAQAYED HGHMGGMNQA LGVIRTCSDC  180
NTTKTPLWRS GPCGPKSLCN ACGIRQRKAR RAMMATGAAP ATDVGAKAAA PGDAAVTVRP  240
PKVKKEKRAV DVDRSLPFKK RCKVVQDHTA THDAASTTVE AAAEPPVVVP TTAPAAAPGS  300
DLVDTIGANW SKSPTAAAAA CFRPSPAPFA VPVPVQDEIT DAAMLLMTLS CELVRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1207247RKARRAMMATGAAPATDVGAKAAAPGDAAVTVRPPKVKKEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.13e-19GATA family protein