PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG052530.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 104aa    MW: 11919.5 Da    PI: 7.8793
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG052530.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR138.14.9e-121796190
              FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                      +fYn Y+ e GF +r  ks+ +        ++ +C +e  r   +k+     +++ + r++C a +++ + +d+ w++++ +  HnH+l+
  TRIDC7AG052530.1 17 DFYNLYSWEKGFGIRYVKSRLN-------VSRTKCMQEIVRGCVDKA---GVENTRSCRCECPALIRLLRAEDDGWYIAEHRGSHNHSLS 96
                      6**************9998877.......45669*********9988...999999*******************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
MVPKIGTSFD TLGEAYDFYN LYSWEKGFGI RYVKSRLNVS RTKCMQEIVR GCVDKAGVEN  60
TRSCRCECPA LIRLLRAEDD GWYIAEHRGS HNHSLSLNFG ETIH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.13e-11FAR1 family protein