PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG052620.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 186aa MW: 20370.7 Da PI: 6.2457

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG052620.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.4	6.7e-18	106	153	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT +Ed++l +v+ +G g+W+ + r g++R++k+c++rw ++l TRIDC7AG052620.4 106 KGPWTSDEDQRLRTYVEAHGEGNWNQVQRNAGLNRCGKSCRLRWANHL 153 79******************************************9996 PP
2	Myb_DNA-binding	26	2.1e-08	159	185	1	28
TSSS-HHHHHHHHHHHHHTTTT-HHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIa 28 +g++++eE+++++++++++G++ W++ a TRIDC7AG052620.4 159 KGPFSKEEEQKIIELHALHGNK-WAKMA 185 79******************.987 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
LHSAPPPHAV DRFLQSFTSP RLVGRWRGCA AASRPGTTLQ MEGKDATLAL PELLKEEVQS 60 PPLSPLSPRS SDDDETEADD SDGEEEEGGA PVGTGGTVVS GPPMMKGPWT SDEDQRLRTY 120 VEAHGEGNWN QVQRNAGLNR CGKSCRLRWA NHLRPNLKKG PFSKEEEQKI IELHALHGNK 180 WAKMAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.1	3e-37	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG052620.4