PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG054560.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 108aa    MW: 12455.3 Da    PI: 5.1486
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG054560.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.82.7e-15798297
                      EEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3  2 fkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93
                      +k l ++d  +   +++p +f+++h    ++ ++s++  +  ++g+ W v+l  +++++ ++ ++ W eF  a++L eg +++F+++ +++f   
  TRIDC7AG054560.3  7 IKLL-RPDDRE--KMTIPDEFVQQHligAESCPSSQKALIIGPTGKLWPVEL--DQRQSDVLYGEVWAEFLTAHDLSEGNILLFRYEVNMSF--S 94
                      5555.333333..389**********9966777999****************..999999**************************998999..7 PP

                      EEEE CS
                B3 94 vkvf 97
                      v+vf
  TRIDC7AG054560.3 95 VQVF 98
                      7766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    
KTRPRFIKLL RPDDREKMTI PDEFVQQHLI GAESCPSSQK ALIIGPTGKL WPVELDQRQS  60
DVLYGEVWAE FLTAHDLSEG NILLFRYEVN MSFSVQVFLP NGCMKEYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.17e-13B3 family protein