PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG054560.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 94aa    MW: 10727.2 Da    PI: 4.2096
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG054560.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.27.2e-145841797
                      E--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3 17 vlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                      ++p +f+++h    ++ ++s++  +  ++g+ W v+l  +++++ ++ ++ W eF  a++L eg +++F+++ +++f   v+vf
  TRIDC7AG054560.4  5 TIPDEFVQQHligAESCPSSQKALIIGPTGKLWPVEL--DQRQSDVLYGEVWAEFLTAHDLSEGNILLFRYEVNMSF--SVQVF 84
                      79*********9966777999****************..999999**************************998999..77766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MFFQTIPDEF VQQHLIGAES CPSSQKALII GPTGKLWPVE LDQRQSDVLY GEVWAEFLTA  60
HDLSEGNILL FRYEVNMSFS VQVFLPNGCM KEYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.13e-11B3 family protein