PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG055550.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 333aa    MW: 36749 Da    PI: 6.5138
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG055550.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF38.51.4e-122462543
                      SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
            SRF-TF  5 nksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                      +k  r  t  kRr+g+ KKAeEL ++C+a+++v+++++ 
  TRIDC7AG055550.1 24 DKNSRCSTSKKRREGLRKKAEELAIMCNAKACVLVYGEG 62
                      6777888999***************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
TLLCRFIPLL EMARKKVALR YILDKNSRCS TSKKRREGLR KKAEELAIMC NAKACVLVYG  60
EGEAVPQVFP SPAEAVPVLD RYMNMPEGNF KKTVNHASFL NQHFGKLQAK GHKLQDVCED  120
NETRILLHKV MLRSNLSSLD GLNIEDLTNV GRKLEVILQS MGESITKISG QPPVFQSQEP  180
YVTNTMDMGS PAMYHAPPPA PYVTNYMHVE SPSTYQAPPA PYITDNMDMG SSMMYPTASP  240
APYVTSGMDM GPSTMFKALP QQQEDALDMM RYGGDLNALV YSGYNSSGRN DTGTSTVFPS  300
GDIDPKRSFE VVFGWQFGGA DPEASSSSPF LPM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11436RKKVALRYILDKNSRCSTSKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28700.14e-20M-type_MADS family protein