PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG058600.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 234aa    MW: 26251.6 Da    PI: 6.2323
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG058600.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.21.7e-1472124155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       ++ +hn+ Er RR ++N+ +++Lr+l+P+a   + kKls  +++ ++ +YI +Lq
  TRIDC7AG058600.1  72 KKLSHNAYERDRRTQLNQLYSTLRSLIPNA--DHTKKLSIPTTVCQVLDYIPELQ 124
                       6789*************************7..35666***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MEHQQFDDAV PSSMIWPLEA DNGFTDELLS LQLPDLDLDF DIHEFSGPAT APAKAASSGG  60
SGLVGSGSGS HKKLSHNAYE RDRRTQLNQL YSTLRSLIPN ADHTKKLSIP TTVCQVLDYI  120
PELQKQVEDL EKKKQELTRA KCRERLQRVK DNTGRIVSAT PLDGNEIMVQ VSLLSNMAAS  180
LPLSKCINVF ENEGLHLISS STFSTEVNRT FYSFHFEVHF YMRPSFPVHT VLTW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.13e-30bHLH family protein