PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG058890.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 261aa    MW: 27777.1 Da    PI: 10.0521
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG058890.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.47e-17156192135
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++Cgt    Tp++Rrgp+g++tLCnaCGl+++ kg+
  TRIDC7AG058890.4 156 CHHCGTNAhnTPMMRRGPEGPRTLCNACGLMWANKGM 192
                       ******9999***********************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
AAAAGAPLDP HGAMVSAIVP PTTGNQLTLS FQGEVYVFDS VSPDKVQAVL LLLGGRELNP  60
GMGAGASSST PYSKRLNFPH RVASLMRFRE KRKERNFDKK IRYTVRKEVA LRMQRNRGQF  120
TSSKPKPDDG TSELATADGS PNWGSVEGRP PSAASCHHCG TNAHNTPMMR RGPEGPRTLC  180
NACGLMWANK GMLRDLSKST PPSLQMVSTG PNDSQNGNTL SQQNGSTLSQ QNGNAAIVPF  240
AEQQNPAPAT DANGHDHGSS T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.21e-76GATA family protein