PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG058890.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 190aa    MW: 20783.2 Da    PI: 10.7
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG058890.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.14.3e-1785121135
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++Cgt    Tp++Rrgp+g++tLCnaCGl+++ kg+
  TRIDC7AG058890.6  85 CHHCGTNAhnTPMMRRGPEGPRTLCNACGLMWANKGM 121
                       ******9999***********************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MIQRLNFPHR VASLMRFREK RKERNFDKKI RYTVRKEVAL RMQRNRGQFT SSKPKPDDGT  60
SELATADGSP NWGSVEGRPP SAASCHHCGT NAHNTPMMRR GPEGPRTLCN ACGLMWANKG  120
MLRDLSKSTP PSLQMVSTGP NDSQNGNTLS QQNGSTLSQQ NGNAAIVPFA EQQNPAPATD  180
ANGHDHGSST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.24e-55GATA family protein